Aliases : CMT3
Description : DNA chromomethylase *(CMT) & original description: none
Gene families : OG0002093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002093_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00024p00193220 | CMT3,... | Chromatin organisation.DNA methylation.RNA-independent... | 0.06 | OrthoFinder output from all 47 species | |
AMTR_s00048p00181490 | CMT2,... | Chromatin organisation.DNA methylation.RNA-independent... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g07783 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Als_g09491 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g30424 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aop_g10939 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Aspi01Gene43679.t1 | CMT3, Aspi01Gene43679 | DNA chromomethylase *(CMT) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0003.g007336 | CMT2 | DNA chromomethylase *(CMT) & original description: CDS=1-1743 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g10809 | CMT3 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.12G007000.1 | CMT3, Ceric.12G007000 | DNA chromomethylase *(CMT) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.34G031800.1 | CMT3, Ceric.34G031800 | DNA chromomethylase *(CMT) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g12073 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Dcu_g46826 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Dcu_g50047 | CMT2 | DNA chromomethylase *(CMT) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g25407 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01024446001 | CMT2 | Chromatin organisation.DNA methylation.RNA-independent... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01025386001 | CMT3 | Chromatin organisation.DNA methylation.RNA-independent... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01033464001 | CMT1, DMT4 | Chromatin organisation.DNA methylation.RNA-independent... | 0.04 | OrthoFinder output from all 47 species | |
Gb_13672 | CMT3 | DNA chromomethylase (CMT) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g12570.1 | CMT3, LOC_Os03g12570 | DNA chromomethylase (CMT) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g01570.1 | CMT3, LOC_Os10g01570 | DNA chromomethylase (CMT) | 0.04 | OrthoFinder output from all 47 species | |
Len_g07756 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Len_g24159 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Len_g28119 | CMT2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g18656 | CMT2 | DNA chromomethylase *(CMT) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
MA_173651g0010 | CMT3 | DNA (cytosine-5)-methyltransferase CMT2 OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species | |
Mp6g08650.1 | CMT3 | DNA chromomethylase (CMT) | 0.04 | OrthoFinder output from all 47 species | |
Msp_g14579 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Nbi_g39436 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Ppi_g62076 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0222.g026232 | CMT3 | DNA chromomethylase *(CMT) & original description: CDS=250-2766 | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g006100.4.1 | CMT3, Solyc01g006100 | DNA chromomethylase (CMT) | 0.05 | OrthoFinder output from all 47 species | |
Solyc08g005400.4.1 | CMT2, Solyc08g005400 | DNA chromomethylase (CMT) | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g100330.2.1 | CMT3, Solyc12g100330 | DNA chromomethylase (CMT) | 0.06 | OrthoFinder output from all 47 species | |
Spa_g08555 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Spa_g26095 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Spa_g52855 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Tin_g07640 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Tin_g10202 | CMT3 | DNA chromomethylase *(CMT) & original description: none | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008168 | methyltransferase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000808 | origin recognition complex | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005664 | nuclear origin of replication recognition complex | IEP | HCCA |
CC | GO:0005694 | chromosome | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0032392 | DNA geometric change | IEP | HCCA |
BP | GO:0032508 | DNA duplex unwinding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |