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  5. Adi_g059765

Adi_g059765 (HUB2)


Aliases : HUB2

Description : not classified & original description: none


Gene families : OG0001584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g059765

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00181670 HUB2,... E3 ubiquitin-protein ligase BRE1-like 2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
AT2G44950 RDO4, HUB1 histone mono-ubiquitination 1 0.03 OrthoFinder output from all 47 species
Adi_g010133 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02632 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13983 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09718 RDO4, HUB1 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10519 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G031800.1 RDO4, HUB1,... E3 ubiquitin ligase *(HUB) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g04109 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018223001 RDO4, HUB1 Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Len_g12516 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430809g0020 HUB2 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_592562g0010 HUB2 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Ppi_g07599 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g006040.3.1 HUB2, Solyc01g006040 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
Spa_g08099 HUB2 E3 ubiquitin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06090 HUB2 E3 ubiquiTin ligase *(HUB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15227 RDO4, HUB1 E3 ubiquiTin ligase *(HUB) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e013143_P005 RDO4, HUB1,... RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!