1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g059684

Adi_g059684


Description : not classified & original description: none


Gene families : OG0001618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001618_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g059684
Cluster HCCA: Cluster_320

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00107p00082420 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G08610 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
Ala_g06941 No alias mRNA helicase *(RH31) & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.27G031600.1 Ceric.27G031600 mRNA helicase *(RH31) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g12157 No alias mRNA helicase *(RH31) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06438 No alias mRNA helicase *(RH31) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10300 No alias mRNA helicase *(RH31) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01045 No alias mRNA helicase *(RH31) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13628 No alias mRNA helicase *(RH31) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g34517 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g12217 No alias mRNA helicase *(RH31) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12179 No alias mRNA helicase *(RH31) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g18878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016261_P001 Zm00001e016261 DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 437 610
IPR001650 Helicase_C 659 764
No external refs found!