Adi_g059515 (PPAN)

Aliases : PPAN

Description : pre-60S ribosomal subunit assembly factor *(SSF1) & original description: none

Gene families : OG0005695 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005695_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g059515

Target	Alias	Description	ECC score	Gene Family Method
AT5G61770	PPAN	PETER PAN-like protein	0.03	OrthoFinder output from all 47 species
Aop_g08209	PPAN	pre-60S ribosomal subunit assembly factor *(SSF1) &...	0.03	OrthoFinder output from all 47 species
Cre10.g450879	PPAN	Peter Pan-like protein OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Dac_g01565	PPAN	pre-60S ribosomal subunit assembly factor *(SSF1) &...	0.03	OrthoFinder output from all 47 species
MA_56165g0010	PPAN	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp6g06030.1	PPAN	pre-60S ribosomal subunit assembly factor (SSF1)	0.02	OrthoFinder output from all 47 species
Msp_g02425	PPAN	pre-60S ribosomal subunit assembly factor *(SSF1) &...	0.02	OrthoFinder output from all 47 species
Ppi_g03742	PPAN	pre-60S ribosomal subunit assembly factor *(SSF1) &...	0.02	OrthoFinder output from all 47 species
Sam_g23959	No alias	pre-60S ribosomal subunit assembly factor *(SSF1) &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
MF	GO:0019843	rRNA binding	IEA	Interproscan
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0004659	prenyltransferase activity	IEP	HCCA
MF	GO:0008318	protein prenyltransferase activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
BP	GO:0018342	protein prenylation	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA
BP	GO:0097354	prenylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007109	Brix	37	279

External Links

No external refs found!