Aliases : ATCFM2, CFM2
Description : not classified & original description: none
Gene families : OG0001162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001162_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00265220 | ATCFM3A, CFM3A,... | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
AT5G16180 | ATCRS1, CRS1 | ortholog of maize chloroplast splicing factor CRS1 | 0.03 | OrthoFinder output from all 47 species | |
Ala_g21267 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g27469 | ATCFM2, CFM2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g18891 | ATCFM2, CFM2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g25274 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g12628 | EMB1865 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g21472 | ATCFM2, CFM2 | plastidial RNA splicing factor *(CFM2) & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01015193001 | No alias | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01018109001 | ATCFM3A, CFM3A | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01032542001 | ATCFM2, CFM2 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g47850.1 | EMB1865, LOC_Os05g47850 | CRM-domain containing factor CFM3,... | 0.02 | OrthoFinder output from all 47 species | |
Len_g55562 | ATCFM2, CFM2 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
MA_10233916g0010 | ATCFM2, CFM2 | CRM-domain containing factor CFM2, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
MA_8161870g0010 | ATCFM2, CFM2 | CRM-domain containing factor CFM2, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g28510 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g52089 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo120007 | No alias | CRM-domain containing factor CFM3,... | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g119450.3.1 | EMB1865, Solyc03g119450 | CRM-domain containing factor CFM3,... | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g039500.4.1 | Solyc07g039500 | CRM-domain containing factor CFM3,... | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g083350.3.1 | ATCFM3A, CFM3A,... | CFM3-type plastidial RNA splicing factor | 0.02 | OrthoFinder output from all 47 species | |
Tin_g06122 | ATCFM2, CFM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e011272_P001 | ATCFM3A, CFM3A,... | CFM3-type plastidial RNA splicing factor | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | HCCA |
CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |