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  5. Adi_g059294

Adi_g059294


Description : not classified & original description: none


Gene families : OG0000613 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000613_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g059294

Target Alias Description ECC score Gene Family Method Actions
AT3G15590 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ehy_g03895 No alias RNA editing factor *(POCO) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g55310.1 LOC_Os02g55310 Pentatricopeptide repeat-containing protein At5g27460... 0.02 OrthoFinder output from all 47 species
LOC_Os04g25410.1 LOC_Os04g25410 Pentatricopeptide repeat-containing protein At1g60770... 0.02 OrthoFinder output from all 47 species
LOC_Os10g35730.1 LOC_Os10g35730 Pentatricopeptide repeat-containing protein At4g02820,... 0.02 OrthoFinder output from all 47 species
LOC_Os12g34340.1 LOC_Os12g34340 Pentatricopeptide repeat-containing protein At4g02820,... 0.02 OrthoFinder output from all 47 species
MA_10431989g0010 No alias RNA editing factor (POCO) 0.02 OrthoFinder output from all 47 species
Nbi_g06280 No alias RNA editing factor *(POCO) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02315 No alias RNA editing factor *(POCO) & original description: none 0.03 OrthoFinder output from all 47 species
Smo420704 No alias Pentatricopeptide repeat-containing protein At1g80270,... 0.03 OrthoFinder output from all 47 species
Solyc07g054090.3.1 Solyc07g054090 Pentatricopeptide repeat-containing protein At2g20710,... 0.02 OrthoFinder output from all 47 species
Tin_g14511 No alias RNA ediTing factor *(POCO) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g37476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 327 356
IPR002885 Pentatricopeptide_repeat 362 389
IPR002885 Pentatricopeptide_repeat 393 442
No external refs found!