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  5. Adi_g058898

Adi_g058898


Description : splicing factor *(SR45a) & original description: none


Gene families : OG0001089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g058898

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0006.g009676 No alias splicing factor *(SR45a) & original description: CDS=1-786 0.03 OrthoFinder output from all 47 species
Nbi_g11813 No alias splicing factor *(SR45a) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013302_P002 Zm00001e013302 Serine/arginine-rich splicing factor SR45a... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 87 156
No external refs found!