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  5. Adi_g058477

Adi_g058477


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g058477

Target Alias Description ECC score Gene Family Method Actions
AT3G12630 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Cba_g45989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g36990 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g53665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 154 191
IPR002653 Znf_A20 23 46
No external refs found!