Adi_g058362 (SHI)


Aliases : SHI

Description : SRS-type transcription factor & original description: none


Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g058362

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00161200 LRP1,... RNA biosynthesis.transcriptional activation.SRS... 0.04 OrthoFinder output from all 47 species
AT5G12330 LRP1 Lateral root primordium (LRP) protein-related 0.05 OrthoFinder output from all 47 species
Adi_g118917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24739 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26536 SHI SRS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27015 SRS1, STY1 SRS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene36810.t1 SHI, Aspi01Gene36810 SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65745.t1 SHI, Aspi01Gene65745 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035783 SHI SRS-type transcription factor & original description: CDS=1-2148 0.03 OrthoFinder output from all 47 species
Cba_g09484 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G035200.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.32G058400.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Dde_g47477 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009812001 SRS5 RNA biosynthesis.transcriptional activation.SRS... 0.05 OrthoFinder output from all 47 species
GSVIVT01037267001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.04 OrthoFinder output from all 47 species
LOC_Os05g32070.1 LRP1, LOC_Os05g32070 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
LOC_Os08g43410.1 SRS1, STY1,... transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
MA_2299g0010 LRP1 transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
Mp3g19510.1 SHI transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Msp_g32313 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26494 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16685 SHI SRS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g59296 SHI SRS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013968 SHI SRS-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023316 SRS1, STY1 not classified & original description: CDS=12-590 0.02 OrthoFinder output from all 47 species
Solyc02g062400.3.1 SRS1, STY1,... transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Solyc02g084680.3.1 SRS1, STY1,... transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Solyc10g054070.1.1 SRS5, Solyc10g054070 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Solyc11g064800.3.1 LRP1, Solyc11g064800 transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
Spa_g29909 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49980 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50442 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29778 SRS1, STY1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004006_P001 SHI, Zm00001e004006 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e010227_P001 SRS1, STY1,... transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e013256_P002 SHI, Zm00001e013256 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e024681_P001 SHI, Zm00001e024681 transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
Zm00001e026854_P001 SHI, Zm00001e026854 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Zm00001e030189_P001 SHI, Zm00001e030189 transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
Zm00001e031567_P001 LRP1, Zm00001e031567 transcription factor (SRS) 0.05 OrthoFinder output from all 47 species
Zm00001e034798_P001 SRS1, STY1,... transcription factor (SRS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!