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  5. Adi_g058017

Adi_g058017


Description : circAdian clock activation factor *(TCP20) & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g058017

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00227430 AT-TCP20, TCP20,... Multi-process regulation.circadian clock.morning element... 0.02 OrthoFinder output from all 47 species
AT5G51910 No alias TCP family transcription factor 0.03 OrthoFinder output from all 47 species
Adi_g010474 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01440 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09244 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05356.t1 AtTCP14, TCP14,... TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05364 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32671 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g09490.1 No alias transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Ore_g25970 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00471 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05095 No alias TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13049 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g116320.3.1 AtTCP14, TCP14,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc05g007420.2.1 Solyc05g007420 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Spa_g17288 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024509_P001 Zm00001e024509 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 118 213
No external refs found!