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  5. Adi_g057981

Adi_g057981


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g057981
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00094p00028710 APL, WDY,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT3G24120 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G29000 PHL1 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g06650 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g22341 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g33847 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04536 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g29471 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19889.t1 Aspi01Gene19889 transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0089.g042590 No alias not classified & original description: CDS=1-831 0.02 OrthoFinder output from all 47 species
Cba_g19840 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g74466 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.02G023400.1 Ceric.02G023400 GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.21G027900.1 Ceric.21G027900 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.28G068700.1 Ceric.28G068700 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cre12.g495100 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Dcu_g04642 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
LOC_Os02g07170.1 LOC_Os02g07170 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os02g07770.1 APL, WDY, LOC_Os02g07770 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g21240.1 PHL1, LOC_Os03g21240 PHR1 transcription factor involved in proline synthesis... 0.04 OrthoFinder output from all 47 species
LOC_Os04g47890.1 LOC_Os04g47890 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Lfl_g32204 KAN2 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430912g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g08700.1 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g18681 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g24340 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g38657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19105 KAN, KAN1 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41489 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g43900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29411 PHL1 transcription factor *(PHR1) & original description: none 0.02 OrthoFinder output from all 47 species
Smo405399 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Solyc11g022470.2.1 Solyc11g022470 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Solyc12g006280.3.1 Solyc12g006280 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Solyc12g017370.3.1 APL, WDY, Solyc12g017370 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e004125_P001 Zm00001e004125 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e013626_P001 Zm00001e013626 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e013758_P003 APL, WDY, Zm00001e013758 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e015514_P001 KAN2, Zm00001e015514 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e037731_P001 APL, WDY, Zm00001e037731 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e037761_P001 Zm00001e037761 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e041868_P002 Zm00001e041868 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 159 205
IPR001005 SANT/Myb 52 102
No external refs found!