Adi_g057776


Description : not classified & original description: none


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g057776

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00146p00080830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
Adi_g020053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G009300.1 Ceric.07G009300 not classified & original description: pacid=50627055... 0.03 OrthoFinder output from all 47 species
Dcu_g05601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017972001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
GSVIVT01024715001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 OrthoFinder output from all 47 species
LOC_Os04g59510.1 LOC_Os04g59510 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g02467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18818 No alias component *(IDM1) of ROS1-recruitment complex & original... 0.02 OrthoFinder output from all 47 species
Pir_g06867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032904_P002 Zm00001e032904 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 724 765
IPR008395 Agenet-like_dom 23 122
IPR032308 TDBD 653 703
No external refs found!