Adi_g057744 (PUB14, ATPUB14)

Aliases : PUB14, ATPUB14

Description : not classified & original description: none

Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g057744

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00072p00171260	PUB14, ATPUB14,...	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
AT1G29340	ATPUB17, PUB17	plant U-box 17	0.04	OrthoFinder output from all 47 species
AT4G21350	PUB8, B80	plant U-box 8	0.02	OrthoFinder output from all 47 species
Adi_g009233	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g28208	ATPUB17, PUB17	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0001.g000295	No alias	not classified & original description: CDS=1-2304	0.03	OrthoFinder output from all 47 species
Azfi_s0003.g007619	PUB13, ATPUB13	not classified & original description: CDS=1-951	0.03	OrthoFinder output from all 47 species
Azfi_s0579.g078276	PUB13, ATPUB13	E3 ubiquitin ligase & original description: CDS=173-2116	0.03	OrthoFinder output from all 47 species
Ceric.13G074400.1	ATPUB17, PUB17,...	E3 ubiquitin ligase & original description:...	0.03	OrthoFinder output from all 47 species
Cre03.g178550	No alias	Dynein assembly factor with WDR repeat domains 1...	0.01	OrthoFinder output from all 47 species
Dac_g08480	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g04450	ATPUB17, PUB17	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g16944	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g07191	PUB18, ATPUB18	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g02771	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g29208	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01009347001	No alias	U-box domain-containing protein 4 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01016225001	PUB14, ATPUB14	U-box domain-containing protein 14 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01023893001	PUB15	U-box domain-containing protein 15 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_12875	PUB13, ATPUB13	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
LOC_Os01g60860.1	LOC_Os01g60860	U-box domain-containing protein 16 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os02g49950.1	LOC_Os02g49950	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
LOC_Os03g16824.1	PUB13, ATPUB13,...	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
LOC_Os06g01304.1	PUB14, ATPUB14,...	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
LOC_Os08g37570.1	PUB15, LOC_Os08g37570	U-box domain-containing protein 15 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os12g38210.1	PUB13, ATPUB13,...	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Lfl_g05609	PUB13, ATPUB13	E3 ubiquitin ligase *(PUB15) & original description: none	0.03	OrthoFinder output from all 47 species
MA_27512g0010	PUB15	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Ore_g17320	PUB13, ATPUB13	E3 ubiquitin ligase *(PUB15) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g33829	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g37794	PUB13, ATPUB13	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g11319	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017664	PUB13, ATPUB13	E3 ubiquitin ligase & original description: CDS=217-2226	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020568	PUB13, ATPUB13	E3 ubiquitin ligase & original description: CDS=347-2224	0.02	OrthoFinder output from all 47 species
Smo181353	PUB13, ATPUB13	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
Smo415326	ATPUB17, PUB17	U-box domain-containing protein 1 OS=Medicago truncatula	0.02	OrthoFinder output from all 47 species
Solyc02g072080.1.1	ATPUB17, PUB17,...	U-box domain-containing protein 17 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc09g018230.1.1	Solyc09g018230	U-box domain-containing protein 16 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc11g008390.2.1	PUB14, ATPUB14,...	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Solyc12g094610.3.1	PUB15, Solyc12g094610	U-box domain-containing protein 15 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Spa_g05552	ATPUB17, PUB17	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g07352	ATPUB17, PUB17	E3 ubiquiTin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e003398_P001	PUB15, Zm00001e003398	U-box domain-containing protein 15 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e013323_P001	PUB15, Zm00001e013323	U-box domain-containing protein 15 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e014377_P001	ATPUB17, PUB17,...	U-box domain-containing protein 4 OS=Oryza sativa subsp....	0.02	OrthoFinder output from all 47 species
Zm00001e036734_P001	PUB14, ATPUB14,...	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	212	250
IPR000225	Armadillo	253	291
IPR003613	Ubox_domain	96	166

External Links

No external refs found!

Adi_g057744 (PUB14, ATPUB14)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation