Adi_g057711

Description : not classified & original description: none

Gene families : OG0004448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004448_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g057711

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00046p00229090	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
AT5G64420	No alias	DNA polymerase V family	0.05	OrthoFinder output from all 47 species
Ceric.13G063900.1	Ceric.13G063900	not classified & original description: pacid=50636739...	0.03	OrthoFinder output from all 47 species
Cre01.g012350	No alias	No description available	0.01	OrthoFinder output from all 47 species
GSVIVT01038520001	No alias	No description available	0.02	OrthoFinder output from all 47 species
LOC_Os02g04270.1	LOC_Os02g04270	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Lfl_g40294	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Mp5g07000.1	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Nbi_g01477	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g37557	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g08178	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e013596_P001	Zm00001e013596	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
MF	GO:0008134	transcription factor binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0031047	RNA-mediated gene silencing	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007015	DNA_pol_V/MYBBP1A	67	881

External Links

No external refs found!

Adi_g057711

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation