Solyc12g055800.3.1 (Solyc12g055800.3)


Aliases : Solyc12g055800.3

Description : 34.1 transport.p- and v-ATPases Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology. vacuolar ATP synthase subunit A (VHA-A)


Gene families : OG_01_0003580 (Gene family) Phylogenetic Tree(s): OG0003580_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g055800.3.1
Cluster HCCA cluster: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AT1G78900 VHA-A vacuolar ATP synthase subunit A 0.11 Gene family
Cpa|evm.model.tig00020537.2 No alias 34.1 transport.p- and v-ATPases Encodes catalytic... 0.02 Gene family
Cre10.g461050 No alias 34.1 transport.p- and v-ATPases Encodes catalytic... 0.04 Gene family
GSVIVT01029546001 No alias 34.1 transport.p- and v-ATPases Encodes catalytic... 0.08 Gene family
LOC_Os06g45120 Os06g0662000 34.1 transport.p- and v-ATPases Encodes catalytic... 0.05 Gene family
Smo167777 PACid_15421544 No description available 0.02 Gene family
Zm00001d015426 GRMZM2G128877 34.1 transport.p- and v-ATPases Encodes catalytic... 0.08 Gene family
Zm00001d053765 GRMZM2G421857 34.1 transport.p- and v-ATPases Encodes catalytic... 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004100 ATPase_F1/V1/A1_a/bsu_N 26 85
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 232 458
IPR031686 ATP-synth_a_Xtn 102 223
No external refs found!