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  5. Adi_g057706

Adi_g057706


Description : not classified & original description: none


Gene families : OG0001278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001278_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g057706

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268480 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.02 OrthoFinder output from all 47 species
Als_g32376 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034183001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.01 OrthoFinder output from all 47 species
LOC_Os02g42590.1 LOC_Os02g42590 COMPASS-like H3K4 histone methylase component WDR5A... 0.01 OrthoFinder output from all 47 species
Pnu_g33949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g082870.4.1 Solyc03g082870 COMPASS-like H3K4 histone methylase component WDR5A... 0.02 OrthoFinder output from all 47 species
Solyc06g052070.3.1 Solyc06g052070 COMPASS-like H3K4 histone methylase component WDR5A... 0.02 OrthoFinder output from all 47 species
Solyc07g063330.4.1 Solyc07g063330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g086430.3.1 Solyc10g086430 COMPASS-like H3K4 histone methylase component WDR5B... 0.02 OrthoFinder output from all 47 species
Spa_g06650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014768_P003 Zm00001e014768 COMPASS-like H3K4 histone methylase component WDR5A... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 572 609
IPR001680 WD40_repeat 721 745
IPR001680 WD40_repeat 535 567
IPR001680 WD40_repeat 437 471
No external refs found!