Solyc12g055710.1.1 (Solyc12g055710.1)


Aliases : Solyc12g055710.1

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g055710.1.1
Cluster HCCA cluster: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AT2G18670 No alias RING/U-box superfamily protein 0.04 Gene family
AT2G34000 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G35000 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G35910 No alias RING/U-box superfamily protein 0.03 Gene family
AT2G42350 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G42360 No alias RING/U-box superfamily protein 0.05 Gene family
AT2G44578 No alias RING/U-box superfamily protein 0.03 Gene family
AT3G05200 ATL6 RING/U-box superfamily protein 0.05 Gene family
AT3G16720 ATL2, TL2 TOXICOS EN LEVADURA 2 0.05 Gene family
AT3G60966 No alias RING/U-box superfamily protein 0.02 Gene family
AT4G15975 No alias RING/U-box superfamily protein 0.03 Gene family
AT4G35480 RHA3B RING-H2 finger A3B 0.03 Gene family
AT5G10380 ATRING1, RING1 RING/U-box superfamily protein 0.03 Gene family
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.05 Gene family
AT5G66070 No alias RING/U-box superfamily protein 0.05 Gene family
GSVIVT01000015001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
GSVIVT01015682001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
GSVIVT01019530001 No alias 35.2 not assigned.unknown RING/U-box superfamily protein 0.02 Gene family
GSVIVT01020665001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
GSVIVT01037142001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os01g20910 Os01g0311100 No description available 0.03 Gene family
LOC_Os02g36330 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.08 Gene family
LOC_Os02g52210 Os02g0759400 No description available 0.04 Gene family
LOC_Os03g05570 Os03g0149800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os03g44636 Os03g0648600 No description available 0.04 Gene family
LOC_Os03g44642 No alias No description available 0.02 Gene family
LOC_Os04g37740 Os04g0450400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
LOC_Os06g11450 Os06g0218300 No description available 0.04 Gene family
LOC_Os06g16060 Os06g0271600 No description available 0.03 Gene family
LOC_Os06g34650 Os06g0537600 No description available 0.02 Gene family
LOC_Os06g34880 Os06g0540200 No description available 0.02 Gene family
LOC_Os08g43670 Os08g0550400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os09g29310 Os09g0468300 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os10g41660 Os10g0566400 No description available 0.02 Gene family
LOC_Os12g24490 Os12g0432600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.03 Gene family
MA_10106144g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10436208g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_10436650g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_12363g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
MA_129306g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_144298g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_152783g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_184439g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_786911g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_80729g0030 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_904294g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Smo121181 PACid_15415477 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo96681 PACid_15409405 No description available 0.02 Gene family
Solyc00g007220.3.1 Solyc00g007220.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.03 Gene family
Solyc01g081040.3.1 Solyc01g081040.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc02g083400.3.1 Solyc02g083400.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc04g074790.2.1 Solyc04g074790.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc09g075320.1.1 Solyc09g075320.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc09g089890.1.1 Solyc09g089890.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc10g008080.2.1 Solyc10g008080.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
Solyc10g011880.1.1 Solyc10g011880.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc11g010330.2.1 Solyc11g010330.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d002535 GRMZM2G146847 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d003497 GRMZM2G171277 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d005936 GRMZM2G015753 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d007609 GRMZM2G041549 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d008914 GRMZM2G014571 No description available 0.04 Gene family
Zm00001d009106 GRMZM2G004519 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d016139 GRMZM2G098925 No description available 0.03 Gene family
Zm00001d016140 GRMZM2G358711 No description available 0.04 Gene family
Zm00001d016682 GRMZM5G860214 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d016840 GRMZM2G460958 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d017404 GRMZM2G409372 No description available 0.02 Gene family
Zm00001d017645 GRMZM2G057789 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.05 Gene family
Zm00001d017923 No alias No description available 0.03 Gene family
Zm00001d020789 GRMZM2G082653 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d021316 GRMZM2G449875 No description available 0.02 Gene family
Zm00001d022154 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d027685 GRMZM2G056804 No description available 0.03 Gene family
Zm00001d027983 GRMZM2G148706 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING E3... 0.03 Gene family
Zm00001d029806 GRMZM2G052344 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d031880 No alias No description available 0.04 Gene family
Zm00001d034369 GRMZM2G135011 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d037019 GRMZM2G026562 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL43 0.02 Gene family
Zm00001d037023 GRMZM2G447566 No description available 0.04 Gene family
Zm00001d037095 GRMZM2G416750 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d037192 GRMZM2G329195 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d045051 GRMZM2G478553 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
Zm00001d046147 No alias No description available 0.02 Gene family
Zm00001d050514 GRMZM2G068239 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d050798 GRMZM2G044773 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d050840 GRMZM2G041344 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d051833 GRMZM5G885045 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 92 135
No external refs found!