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  5. Adi_g057318

Adi_g057318


Description : not classified & original description: none


Gene families : OG0005690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g057318

Target Alias Description ECC score Gene Family Method Actions
AT2G41020 No alias WW domain-containing protein 0.02 OrthoFinder output from all 47 species
Aev_g04143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46847.t1 Aspi01Gene46847 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g035112 No alias not classified & original description: CDS=147-2690 0.03 OrthoFinder output from all 47 species
Cba_g04685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre12.g527600 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g16258 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g02843 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g68760.1 LOC_Os01g68760 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g06480.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g24898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g005110.3.1 Solyc11g005110 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g15546 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001202 WW_dom 454 484
IPR001202 WW_dom 504 534
No external refs found!