Adi_g057101 (PDF2)


Aliases : PDF2

Description : HD-ZIP IV-type transcription factor & original description: none


Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g057101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00094630 EDT1, HDG11,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AT4G00730 ANL2, AHDP Homeobox-leucine zipper family protein / lipid-binding... 0.02 OrthoFinder output from all 47 species
AT4G04890 PDF2 protodermal factor 2 0.06 OrthoFinder output from all 47 species
AT4G21750 ATML1 Homeobox-leucine zipper family protein / lipid-binding... 0.06 OrthoFinder output from all 47 species
Adi_g080315 HDG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18649 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15179 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23646 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25555 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05720 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07199 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g53005 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62966 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08452 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07013 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g014154 ATML1 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035524 PDF2 HD-ZIP IV-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0301.g063735 ATML1 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0591.g078757 ATML1 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s1811.g107141 ATML1 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g06562 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G001800.1 PDF2, Ceric.01G001800 HD-ZIP IV-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g03815 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11376 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g13002 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g15268 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15269 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20177 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g25466 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g39944 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g13320 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030605001 HDG2 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
LOC_Os06g10600.1 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
LOC_Os08g08820.2 PDF2, LOC_Os08g08820 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
LOC_Os10g42490.1 HDG5, HB-7,... transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
MA_10318273g0010 HDG2 transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
MA_10374232g0010 PDF2 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
MA_110607g0010 PDF2 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
MA_122121g0010 PDF2 transcription factor (HD-ZIP IV) 0.06 OrthoFinder output from all 47 species
MA_17048g0010 HDG5, HB-7 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Msp_g14857 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25796 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26336 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13220 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18283 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37968 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03228 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08965 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17562 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013927 PDF2 HD-ZIP IV-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016693 PDF2 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc03g098200.4.1 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Solyc06g072310.3.1 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Solyc07g041850.3.1 PDF2, Solyc07g041850 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Solyc09g015110.2.1 Solyc09g015110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g005330.3.1 PDF2, Solyc10g005330 transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Solyc10g006420.4.1 PDF2, Solyc10g006420 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Solyc12g005830.3.1 PDF2, Solyc12g005830 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Spa_g06195 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07168 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16174 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22119 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46298 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51145 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11469 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13777 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31372 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43791 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006870_P004 HDG2, Zm00001e006870 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Zm00001e015997_P002 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Zm00001e017088_P001 HDG1, HD-GL2-1,... transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Zm00001e021649_P002 PDF2, Zm00001e021649 transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Zm00001e023786_P003 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Zm00001e034755_P001 HDG1, HD-GL2-1,... transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Zm00001e036212_P002 EDT1, HDG11,... transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Zm00001e039947_P001 HDG2, Zm00001e039947 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Zm00001e040312_P001 PDF2, Zm00001e040312 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Zm00001e041695_P001 PDF2, Zm00001e041695 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Zm00001e042218_P002 HDG2, Zm00001e042218 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 118 173
IPR002913 START_lipid-bd_dom 297 516
No external refs found!