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  5. Adi_g057088

Adi_g057088 (AFB2)


Aliases : AFB2

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g057088

Target Alias Description ECC score Gene Family Method Actions
AT4G03190 AFB1, ATGRH1, GRH1 GRR1-like protein 1 0.02 OrthoFinder output from all 47 species
AT5G49980 AFB5 auxin F-box protein 5 0.02 OrthoFinder output from all 47 species
Adi_g005427 AFB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18642 TIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04355 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene01669.t1 AFB2, Aspi01Gene01669 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene60504.t1 TIR1, Aspi01Gene60504 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Cba_g22715 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ceric.05G036600.1 COI1, Ceric.05G036600 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01003183001 TIR1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01009126001 AFB5 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Len_g13483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10189662g0010 AFB2 Protein AUXIN SIGNALING F-BOX 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_47869g0020 No alias F-box protein FBX14 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_646265g0010 COI1 Coronatine-insensitive protein homolog 1a OS=Oryza... 0.03 OrthoFinder output from all 47 species
MA_78902g0010 AFB5 component TIR1/AFB of auxin receptor complex 0.03 OrthoFinder output from all 47 species
MA_92309g0010 TIR1 component TIR1/AFB of auxin receptor complex. component... 0.03 OrthoFinder output from all 47 species
Mp2g26590.1 COI1 component COI of jasmonic acid receptor complex 0.03 OrthoFinder output from all 47 species
Pp3c9_1680V3.1 Pp3c9_1680 RNI-like superfamily protein 0.01 OrthoFinder output from all 47 species
Spa_g28126 COI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000649_P001 Zm00001e000649 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Zm00001e008324_P001 AFB2, Zm00001e008324 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Zm00001e026935_P001 COI1, Zm00001e026935 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
Zm00001e027505_P001 TIR1, Zm00001e027505 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041567 COI1_F-box 1 38
IPR041101 Transp_inhibit 59 104
No external refs found!