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  5. Adi_g056751

Adi_g056751


Description : methylation reader *(MBD10-11) & original description: none


Gene families : OG0000919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g056751

Target Alias Description ECC score Gene Family Method Actions
Adi_g110469 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08850 MBD10 methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05790 MBD10 methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g00453 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05333 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g42550.1 MBD10, LOC_Os12g42550 methylation reader (MBD10-11) 0.04 OrthoFinder output from all 47 species
Pir_g09426 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18181 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03105 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26081 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 17 85
No external refs found!