1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g13407

Ehy_g13407


Description : not classified & original description: none


Gene families : OG0001954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g13407

Target Alias Description ECC score Gene Family Method Actions
Ala_g06200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19470.t1 Aspi01Gene19470 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53305.t1 Aspi01Gene53305 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G080800.1 Ceric.11G080800 not classified & original description: pacid=50596211... 0.02 OrthoFinder output from all 47 species
LOC_Os02g10730.1 LOC_Os02g10730 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g20567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_116686g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_22384g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g46454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000690 No alias not classified & original description: CDS=287-850 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024065 No alias not classified & original description: CDS=1-495 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024295 No alias not classified & original description: CDS=343-912 0.02 OrthoFinder output from all 47 species
Solyc07g008280.4.1 Solyc07g008280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g21937 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g36774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025003_P001 Zm00001e025003 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!