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  5. Adi_g056632

Adi_g056632


Description : component *(CWC22) of MAC spliceosome-associated complex & original description: none


Gene families : OG0004452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g056632

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00125760 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g57308 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Aob_g11045 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Aop_g08815 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Ceric.1Z119600.1 Ceric.1Z119600 component *(CWC22) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000169.28 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre06.g259800 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g04879 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Ehy_g09084 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01026760001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os12g15420.1 LOC_Os12g15420 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g22570.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g20824 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Ore_g44880 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Ppi_g40197 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Sam_g50425 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Solyc04g079920.4.1 Solyc04g079920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g10884 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.02 OrthoFinder output from all 47 species
Tin_g28150 No alias component *(CWC22) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Zm00001e039666_P001 Zm00001e039666 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0030684 preribosome IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 692 798
No external refs found!