1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g055972

Adi_g055972


Description : regulatory protein *(SIEL) of plasmodesmata intercellular trafficking & original description: none


Gene families : OG0007306 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007306_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g055972

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00025400 evm_27.TU.AmTr_v1... Protein translocation.plasmodesmata intercellular... 0.02 OrthoFinder output from all 47 species
AT3G08800 No alias ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Ceric.13G038600.1 Ceric.13G038600 regulatory protein *(SIEL) of plasmodesmata... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001269.3 No alias Protein translocation.plasmodesmata intercellular... 0.01 OrthoFinder output from all 47 species
GSVIVT01030267001 No alias Protein translocation.plasmodesmata intercellular... 0.03 OrthoFinder output from all 47 species
Mp4g11530.1 No alias component DSP3 of DSP snRNA processing complex. SIEL... 0.03 OrthoFinder output from all 47 species
Pir_g42608 No alias regulatory protein *(SIEL) of plasmodesmata... 0.02 OrthoFinder output from all 47 species
Smo439432 No alias Protein translocation.plasmodesmata intercellular... 0.02 OrthoFinder output from all 47 species
Solyc01g090260.5.1.1 Solyc01g090260 component DSP3 of DSP snRNA processing complex. SIEL... 0.03 OrthoFinder output from all 47 species
Spa_g53551 No alias regulatory protein *(SIEL) of plasmodesmata... 0.04 OrthoFinder output from all 47 species
Tin_g19941 No alias regulatory protein *(SIEL) of plasmodesmata... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!