Solyc12g042590.2.1 (Solyc12g042590.2)


Aliases : Solyc12g042590.2

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. WRKY DNA-binding protein 40 (WRKY40)


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g042590.2.1
Cluster HCCA cluster: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT1G29280 ATWRKY65, WRKY65 WRKY DNA-binding protein 65 0.02 Gene family
AT1G64000 WRKY56, ATWRKY56 WRKY DNA-binding protein 56 0.03 Gene family
AT1G66560 ATWRKY64, WRKY64 WRKY DNA-binding protein 64 0.05 Gene family
AT1G68150 WRKY9, ATWRKY9 WRKY DNA-binding protein 9 0.02 Gene family
AT2G25000 ATWRKY60, WRKY60 WRKY DNA-binding protein 60 0.02 Gene family
AT2G40750 WRKY54, ATWRKY54 WRKY DNA-binding protein 54 0.03 Gene family
AT2G47260 WRKY23, ATWRKY23 WRKY DNA-binding protein 23 0.02 Gene family
AT3G01080 ATWRKY58, WRKY58 WRKY DNA-binding protein 58 0.02 Gene family
AT3G56400 ATWRKY70, WRKY70 WRKY DNA-binding protein 70 0.02 Gene family
AT4G18170 WRKY28, ATWRKY28 WRKY DNA-binding protein 28 0.03 Gene family
AT4G31800 WRKY18, ATWRKY18 WRKY DNA-binding protein 18 0.04 Gene family
AT5G07100 WRKY26 WRKY DNA-binding protein 26 0.02 Gene family
AT5G15130 WRKY72, ATWRKY72 WRKY DNA-binding protein 72 0.03 Gene family
AT5G24110 ATWRKY30, WRKY30 WRKY DNA-binding protein 30 0.03 Gene family
AT5G41570 ATWRKY24, WRKY24 WRKY DNA-binding protein 24 0.04 Gene family
GSVIVT01001286001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01008046001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01010525001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01015952001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01018300001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
GSVIVT01019419001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
GSVIVT01019511001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01021252001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01021397001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
GSVIVT01022245001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01022259001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
GSVIVT01026965001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01027069001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01028147001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01028244001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01030453001 No alias No description available 0.03 Gene family
GSVIVT01032661001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
GSVIVT01033063001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01033195001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
GSVIVT01034148001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01034968001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01035884001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
LOC_Os01g14440 Os01g0246700 No description available 0.02 Gene family
LOC_Os01g53260 Os01g0734000 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
LOC_Os01g60520 Os01g0820700 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os02g16540 Os02g0265200 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os02g47060 Os02g0698800 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os02g53100 Os02g0770500 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os03g21710 Os03g0335200 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os04g51560 Os04g0605100 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
LOC_Os05g40060 Os05g0478400 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os09g25060 Os09g0417600 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os09g25070 Os09g0417800 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os10g42850 Os10g0579400 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os11g02470 Os11g0116600 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
LOC_Os12g02420 Os12g0116400 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_10428091g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
MA_10432362g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_10434450g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_133396g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_136551g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
MA_20468g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_2121641g0010 No alias No description available 0.02 Gene family
MA_306130g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_7513437g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
MA_892467g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_934202g0010 No alias No description available 0.02 Gene family
MA_93790g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.06 Gene family
Smo77979 PACid_15422458 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Smo92733 PACid_15420668 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc01g079260.3.1 Solyc01g079260.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Solyc01g089960.3.1 Solyc01g089960.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc01g095100.3.1 Solyc01g095100.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc01g095630.3.1 Solyc01g095630.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc02g032950.3.1 Solyc02g032950.3 No description available 0.02 Gene family
Solyc02g071130.3.1 Solyc02g071130.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc02g080890.3.1 Solyc02g080890.3 No description available 0.02 Gene family
Solyc02g088345.1.1 Solyc02g088345.1 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
Solyc02g094270.2.1 Solyc02g094270.2 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc03g095770.3.1 Solyc03g095770.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.06 Gene family
Solyc04g078550.3.1 Solyc04g078550.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc06g066370.3.1 Solyc06g066370.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc06g068460.3.1 Solyc06g068460.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Solyc08g008280.3.1 Solyc08g008280.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc08g062490.3.1 Solyc08g062490.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc08g067340.3.1 Solyc08g067340.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Solyc08g067360.3.1 Solyc08g067360.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc08g081630.2.1 Solyc08g081630.2 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Solyc09g014990.3.1 Solyc09g014990.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Solyc10g011910.3.1 Solyc10g011910.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc10g019160.2.1 Solyc10g019160.2 No description available 0.03 Gene family
Solyc10g074945.1.1 Solyc10g074945.1 No description available 0.04 Gene family
Solyc12g096350.2.1 Solyc12g096350.2 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Zm00001d002452 GRMZM2G024898 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d004086 GRMZM2G102583 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d005622 GRMZM2G163418 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d007329 GRMZM2G106560 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d008794 GRMZM2G083350 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d010617 GRMZM2G432583 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d010805 GRMZM2G015433 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d011133 GRMZM2G137802 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Zm00001d011237 GRMZM2G304573 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Zm00001d011496 GRMZM2G411766 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d012482 GRMZM2G036703 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d012789 GRMZM2G111354 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d016052 GRMZM2G048450 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d016457 GRMZM2G073272 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d017712 GRMZM5G823157 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d018203 GRMZM5G894568 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d020136 GRMZM2G139815 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d030139 GRMZM2G383594 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d037607 GRMZM2G163054 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d037854 GRMZM2G127064 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Zm00001d038023 GRMZM2G012724 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d038451 GRMZM2G169966 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
Zm00001d038761 GRMZM2G401521 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d038843 GRMZM5G863420 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d040554 GRMZM2G327349 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
Zm00001d041129 No alias No description available 0.02 Gene family
Zm00001d041958 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d043474 GRMZM2G141299 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Zm00001d043569 GRMZM2G040298 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Zm00001d043950 GRMZM2G151763 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d044010 GRMZM2G408462 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Zm00001d044162 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d047523 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
Zm00001d052357 GRMZM2G063216 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 136 193
No external refs found!