Solyc12g042300.2.1 (Solyc12g042300.2)


Aliases : Solyc12g042300.2

Description : 34.3 transport.amino acids Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays. peptide transporter 2 (PTR2)


Gene families : OG_01_0000015 (Gene family) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g042300.2.1
Cluster HCCA cluster: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AT1G12110 NRT1.1, B-1,... nitrate transporter 1.1 0.04 Gene family
AT1G22550 No alias Major facilitator superfamily protein 0.1 Gene family
AT1G32450 NRT1.5 nitrate transporter 1.5 0.04 Gene family
AT1G68570 No alias Major facilitator superfamily protein 0.02 Gene family
AT2G40460 No alias Major facilitator superfamily protein 0.02 Gene family
GSVIVT01009804001 No alias 34.13 transport.peptides and oligopeptides Encodes a... 0.02 Gene family
GSVIVT01015523001 No alias 34.4 transport.nitrate Major facilitator superfamily protein 0.02 Gene family
GSVIVT01018395001 No alias 34.13 transport.peptides and oligopeptides Transmembrane... 0.04 Gene family
GSVIVT01026066001 No alias 34.13 transport.peptides and oligopeptides Major... 0.03 Gene family
GSVIVT01026070001 No alias 34.13 transport.peptides and oligopeptides Major... 0.06 Gene family
GSVIVT01027876001 No alias 34.13 transport.peptides and oligopeptides Encodes a di-... 0.02 Gene family
LOC_Os01g65210 Os01g0872600 34.13 transport.peptides and oligopeptides Major... 0.02 Gene family
LOC_Os02g47090 Os02g0699000 34.3 transport.amino acids Encodes a di- and tri-peptide... 0.02 Gene family
LOC_Os02g48570 Os02g0716800 34.13 transport.peptides and oligopeptides Transmembrane... 0.04 Gene family
LOC_Os04g50950 Os04g0597800 34.3 transport.amino acids Encodes a di- and tri-peptide... 0.03 Gene family
LOC_Os05g27010 Os05g0335800 34.13 transport.peptides and oligopeptides Major... 0.02 Gene family
LOC_Os05g35594 Os05g0430900 34.13 transport.peptides and oligopeptides Major... 0.01 Gene family
LOC_Os06g49240 Os06g0706100 34.13 transport.peptides and oligopeptides Major... 0.05 Gene family
LOC_Os10g02080 Os10g0109700 34.3 transport.amino acids Encodes a di- and tri-peptide... 0.03 Gene family
MA_411730g0010 No alias 34.13 transport.peptides and oligopeptides Major... 0.02 Gene family
MA_89317g0010 No alias 34.13 transport.peptides and oligopeptides Major... 0.02 Gene family
Smo232069 PACid_15416661 No description available 0.01 Gene family
Smo404409 PACid_15410114 No description available 0.02 Gene family
Smo415640 PACid_15421730 34.13 transport.peptides and oligopeptides Encodes a... 0.03 Gene family
Smo441824 PACid_15410954 No description available 0.03 Gene family
Smo88337 PACid_15405601 No description available 0.02 Gene family
Smo97069 PACid_15407576 No description available 0.03 Gene family
Solyc06g060620.3.1 Solyc06g060620.3 34.4 transport.nitrate Encodes NRT1.1 (CHL1), a... 0.01 Gene family
Solyc08g007430.2.1 Solyc08g007430.2 34.4 transport.nitrate Encodes NRT1.1 (CHL1), a... 0.04 Gene family
Solyc08g077170.3.1 Solyc08g077170.3 34.13 transport.peptides and oligopeptides Transmembrane... 0.03 Gene family
Solyc09g090470.3.1 Solyc09g090470.3 34.13 transport.peptides and oligopeptides Encodes a di-... 0.05 Gene family
Solyc10g024490.2.1 Solyc10g024490.2 34.13 transport.peptides and oligopeptides Transmembrane... 0.03 Gene family
Solyc12g089230.2.1 Solyc12g089230.2 34.13 transport.peptides and oligopeptides Encodes a... 0.03 Gene family
Zm00001d017713 GRMZM2G076313 34.3 transport.amino acids Encodes a di- and tri-peptide... 0.04 Gene family
Zm00001d026221 No alias 34.3 transport.amino acids Encodes a di- and tri-peptide... 0.02 Gene family
Zm00001d027285 GRMZM2G161483 34.4 transport.nitrate Encodes NRT1.1 (CHL1), a... 0.03 Gene family
Zm00001d029932 GRMZM2G161459 34.4 transport.nitrate Encodes NRT1.1 (CHL1), a... 0.03 Gene family
Zm00001d038185 GRMZM2G322220 34.13 transport.peptides and oligopeptides Major... 0.02 Gene family
Zm00001d038333 GRMZM2G077498 34.13 transport.peptides and oligopeptides Major... 0.03 Gene family
Zm00001d051548 GRMZM2G012242 34.3 transport.amino acids Encodes a di- and tri-peptide... 0.04 Gene family

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan
MF GO:0022857 transmembrane transporter activity IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000109 POT_fam 114 545
No external refs found!