1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g13247

Ehy_g13247


Description : substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin ligase complex & original description: none


Gene families : OG0006328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006328_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g13247

Target Alias Description ECC score Gene Family Method Actions
Cre04.g217750 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os10g32710.1 LOC_Os10g32710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g01970 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc06g008110.4.1 Solyc06g008110 Transcription initiation factor TFIID subunit 5... 0.03 OrthoFinder output from all 47 species
Tin_g12920 No alias substrate adaptor *(OZS3) of CUL4-DDB1 E3 ubiquiTin... 0.02 OrthoFinder output from all 47 species
Zm00001e012730_P002 Zm00001e012730 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 323 355
IPR001680 WD40_repeat 224 259
IPR001680 WD40_repeat 124 157
No external refs found!