Solyc12g042080.2.1 (Solyc12g042080.2)

Aliases : Solyc12g042080.2

Description : protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S11 Encodes a putative ribosomal protein S11 (RPS11-beta). ribosomal protein S11-beta (RPS11-BETA)

Gene families : OG_01_0002752 (Gene family) Phylogenetic Tree(s): OG0002752_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g042080.2.1
Cluster HCCA cluster: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT3G48930 EMB1080 Nucleic acid-binding, OB-fold-like protein 0.33 Gene family
AT4G30800 No alias Nucleic acid-binding, OB-fold-like protein 0.18 Gene family
AT5G23740 RPS11-BETA ribosomal protein S11-beta 0.14 Gene family
Cpa|evm.model.tig00000551.22 No alias protein.synthesis.ribosomal... 0.2 Gene family
Cre12.g514500 No alias protein.synthesis.ribosomal... 0.3 Gene family
GSVIVT01012877001 No alias protein.synthesis.ribosomal... 0.25 Gene family
GSVIVT01035927001 No alias protein.synthesis.ribosomal... 0.26 Gene family
LOC_Os04g52361 Os04g0613600 protein.synthesis.ribosomal... 0.05 Gene family
LOC_Os08g10608 Os08g0207000 protein.synthesis.ribosomal... 0.15 Gene family
MA_19350g0010 No alias protein.synthesis.ribosomal... 0.07 Gene family
Smo268639 PACid_15415730 No description available 0.18 Gene family
Solyc06g073790.3.1 Solyc06g073790.3 protein.synthesis.ribosomal... 0.02 Gene family
Zm00001d002339 GRMZM2G044800 protein.synthesis.ribosomal... 0.22 Gene family
Zm00001d026286 GRMZM2G019325 protein.synthesis.ribosomal... 0.21 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan
CC GO:0005622 intracellular IEA InterProScan
CC GO:0005840 ribosome IEA InterProScan
BP GO:0006412 translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 74 142
IPR032440 Ribosomal_S11_N 4 72
No external refs found!