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  5. Adi_g054729

Adi_g054729


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g054729

Target Alias Description ECC score Gene Family Method Actions
AT5G53060 No alias RNA-binding KH domain-containing protein 0.04 OrthoFinder output from all 47 species
AT5G64390 HEN4 RNA-binding KH domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g055146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33155 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07339 HEN4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G027100.1 Ceric.25G027100 not classified & original description: pacid=50594480... 0.04 OrthoFinder output from all 47 species
Ceric.32G061200.1 Ceric.32G061200 not classified & original description: pacid=50597564... 0.03 OrthoFinder output from all 47 species
Cre17.g707400 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g12897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g24061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012514001 HEN4 KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_31686 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Lfl_g10062 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429211g0010 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Mp3g04880.1 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Ore_g18548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008079 No alias not classified & original description: CDS=527-2194 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020404 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Sam_g13844 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Solyc03g034200.3.1 Solyc03g034200 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Spa_g22547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004486_P005 Zm00001e004486 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e030716_P002 Zm00001e030716 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Zm00001e037033_P001 Zm00001e037033 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 70 132
IPR004088 KH_dom_type_1 306 341
IPR004088 KH_dom_type_1 221 271
No external refs found!