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  5. Adi_g054676

Adi_g054676 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : TUB-type transcription factor & original description: none


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g054676

Target Alias Description ECC score Gene Family Method Actions
AT5G18680 AtTLP11, TLP11 tubby like protein 11 0.05 OrthoFinder output from all 47 species
Adi_g003799 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05261 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26936.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60509.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71057.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15697 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G015500.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G011000.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000367.38 TLP2, AtTLP2 RNA biosynthesis.transcriptional activation.TUB... 0.01 OrthoFinder output from all 47 species
GSVIVT01017810001 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder output from all 47 species
LOC_Os02g47640.1 TLP2, AtTLP2,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Len_g04744 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05272 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42651 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13921 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021211 AtTLP3, TLP3 TUB-type transcription factor & original description: CDS=126-977 0.03 OrthoFinder output from all 47 species
Zm00001e015581_P001 TLP2, AtTLP2,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Zm00001e019166_P001 TLP10, AtTLP10,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Zm00001e023326_P001 TLP2, AtTLP2,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Zm00001e032131_P001 AtTLP7, TLP7,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 2 193
No external refs found!