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  5. Adi_g054623

Adi_g054623 (ARR1, RR1)


Aliases : ARR1, RR1

Description : subgroup ARR-B transcription factor & original description: none


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g054623

Target Alias Description ECC score Gene Family Method Actions
AT3G10760 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G62670 RR20, MEE41, ARR20 response regulator 20 0.02 OrthoFinder output from all 47 species
AT4G31920 ARR10, RR10 response regulator 10 0.02 OrthoFinder output from all 47 species
Ala_g02179 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07229 RR2, ARR2 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50793 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59212 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06717 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20636 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69647 ARR11 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene07825.t1 RR2, ARR2,... subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45257.t1 ARR1, RR1,... subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13893 ARR11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.21G058200.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.39G052700.1 MYBC1, Ceric.39G052700 MYB-RELATED transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Cre17.g696750 No alias Transcription factor LUX OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g15966 ARR11 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51493 RR14, ARR14 subgroup ARR-B transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g40960 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ehy_g06024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26693 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24821 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11171 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Pir_g66612 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05145 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Ppi_g12654 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002150 ARR11 subgroup ARR-B transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019454 No alias component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Solyc01g065540.3.1 ARR1, RR1, Solyc01g065540 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Solyc10g078310.2.1 Solyc10g078310 Transcription factor MYBC1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e013844_P002 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Zm00001e028539_P002 ARR11, Zm00001e028539 B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 41 150
IPR001005 SANT/Myb 224 274
No external refs found!