MA_10436130g0020


Description : RS31/40/41 RNA splicing factor


Gene families : OG_01_0001617 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001617_tree ,
OG_02_0001638 (LandPlants) Phylogenetic Tree(s): OG_02_0001638_tree ,
OG_03_0001180 (SeedPlants) Phylogenetic Tree(s): OG_03_0001180_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436130g0020
Cluster HCCA: Cluster_402

Target Alias Description ECC score Gene Family Method Actions
AT5G52040 At-RS41, RS41, ATRSP41 RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 Archaeplastida
Cpa|evm.model.tig00000852.9 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
Cre16.g674250 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 Archaeplastida
LOC_Os04g02870.1 No alias RS31/40/41 RNA splicing factor 0.03 Archaeplastida
MA_10434350g0010 No alias RS31/40/41 RNA splicing factor 0.04 Archaeplastida
Solyc01g091750.3.1 No alias RS31/40/41 RNA splicing factor 0.03 Archaeplastida
Solyc10g009330.3.1 No alias RS31/40/41 RNA splicing factor 0.02 Archaeplastida
Zm00001e013507_P001 No alias RS31/40/41 RNA splicing factor 0.04 Archaeplastida
AT5G52040 At-RS41, RS41, ATRSP41 RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 LandPlants
LOC_Os04g02870.1 No alias RS31/40/41 RNA splicing factor 0.03 LandPlants
MA_10434350g0010 No alias RS31/40/41 RNA splicing factor 0.04 LandPlants
Solyc01g091750.3.1 No alias RS31/40/41 RNA splicing factor 0.03 LandPlants
Solyc10g009330.3.1 No alias RS31/40/41 RNA splicing factor 0.02 LandPlants
Zm00001e013507_P001 No alias RS31/40/41 RNA splicing factor 0.04 LandPlants
AT5G52040 At-RS41, RS41, ATRSP41 RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 SeedPlants
MA_10434350g0010 No alias RS31/40/41 RNA splicing factor 0.04 SeedPlants
Solyc01g091750.3.1 No alias RS31/40/41 RNA splicing factor 0.02 SeedPlants
Solyc10g009330.3.1 No alias RS31/40/41 RNA splicing factor 0.02 SeedPlants
Zm00001e013507_P001 No alias RS31/40/41 RNA splicing factor 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 98 160
IPR000504 RRM_dom 4 63
No external refs found!