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  5. Adi_g052232

Adi_g052232


Description : not classified & original description: none


Gene families : OG0002889 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002889_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g052232

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00187330 evm_27.TU.AmTr_v1... Prolycopene isomerase, chloroplastic OS=Daucus carota 0.03 OrthoFinder output from all 47 species
Aop_g00730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08553 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g27219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G052400.1 Ceric.23G052400 not classified & original description: pacid=50610225... 0.05 OrthoFinder output from all 47 species
Dac_g12181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g62510.1 LOC_Os03g62510 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.05 OrthoFinder output from all 47 species
MA_10428345g0020 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Ppi_g10834 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g62907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011669_P002 Zm00001e011669 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004832 valine-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006438 valyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 76 572
No external refs found!