Adi_g052169 (GAMMA-H2AX, HTA5,...)

Aliases : GAMMA-H2AX, HTA5, G-H2AX, H2AXA

Description : histone *(H2A) & original description: none

Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g052169

Target	Alias	Description	ECC score	Gene Family Method
Aev_g01852	GAMMA-H2AX,...	histone *(H2A) & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.31G042200.1	HTA2, Ceric.31G042200	histone *(H2A) & original description: pacid=50574126...	0.03	OrthoFinder output from all 47 species
GSVIVT01002735001	RAT5, HTA1, ATHTA1	Chromatin organisation.histones.H2A-type histone	0.02	OrthoFinder output from all 47 species
GSVIVT01002746001	RAT5, HTA1, ATHTA1	Chromatin organisation.histones.H2A-type histone	0.02	OrthoFinder output from all 47 species
MA_130065g0010	HTA6	histone (H2A)	0.03	OrthoFinder output from all 47 species
MA_213048g0010	HTA7	histone (H2A)	0.03	OrthoFinder output from all 47 species
Pir_g58817	RAT5, HTA1, ATHTA1	histone *(H2A) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	128	160
IPR007125	Histone_H2A/H2B/H3	48	125

External Links

No external refs found!