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  5. Adi_g051540

Adi_g051540 (ATRAC11, ARAC11,...)


Aliases : ATRAC11, ARAC11, ROP1, ROP1AT, ATROP1

Description : not classified & original description: none


Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g051540

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00152p00020750 ARAC3, RAC3,... Multi-process regulation.Rop GTPase regulatory... 0.01 OrthoFinder output from all 47 species
AT1G75840 ATROP4, ROP4,... RAC-like GTP binding protein 5 0.02 OrthoFinder output from all 47 species
AT5G45970 ARAC2, RAC2,... RAC-like 2 0.02 OrthoFinder output from all 47 species
AT5G62880 ATRAC10, ARAC10,... RAC-like 10 0.02 OrthoFinder output from all 47 species
Aev_g13243 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23892 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01235 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G052700.1 ARAC3, RAC3,... small GTPase *(ROP) & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01007804001 ATRAC10, ARAC10,... Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
GSVIVT01015359001 ARAC7, ROP9,... Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
LOC_Os02g20850.1 ATRAC1, ROP3,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species
LOC_Os06g12790.1 ATRAC8, ATROP10,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species
MA_10426447g0010 ATRAC4, ARAC4,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species
Nbi_g13115 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g04900 No alias small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07595 No alias small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0030014 CCR4-NOT complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 1 150
No external refs found!