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  5. Adi_g051114

Adi_g051114


Description : E3 ubiquitin ligase *(BRH) & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g051114
Cluster HCCA: Cluster_352

Target Alias Description ECC score Gene Family Method Actions
AT3G10910 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g18221 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g07686 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Cba_g15357 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Ehy_g07562 XERICO not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g11460.1 ATL43, LOC_Os01g11460 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os02g33720.1 LOC_Os02g33720 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g28080.1 ATL3, LOC_Os03g28080 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
LOC_Os10g39450.1 RHA3B, LOC_Os10g39450 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g27111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10244600g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_10434759g0010 BRH1 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_124750g0010 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_214717g0010 RHA3B no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_25345g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_31462g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_43543g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Pir_g17973 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Pir_g57166 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g64245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g068415.1.1 RHA3A, Solyc02g068415 RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc03g114190.1.1 Solyc03g114190 RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g074820.3.1 Solyc04g074820 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc11g005300.2.1 Solyc11g005300 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Tin_g03083 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species
Tin_g05381 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.07 OrthoFinder output from all 47 species
Tin_g20702 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species
Zm00001e001923_P001 ATL3, Zm00001e001923 RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e007956_P001 ATRING1, RING1,... RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Zm00001e019779_P001 Zm00001e019779 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e031874_P001 Zm00001e031874 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 96 140
No external refs found!