Ehy_g12790

Description : subunit alpha of coat protein complex & original description: none

Gene families : OG0001943 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001943_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g12790
Cluster	HCCA: Cluster_49

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00186p00045360	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
AT1G62020	No alias	Coatomer, alpha subunit	0.03	OrthoFinder output from all 47 species
AT2G21390	No alias	Coatomer, alpha subunit	0.04	OrthoFinder output from all 47 species
Adi_g055850	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g08580	No alias	subunit alpha of coat protein complex & original...	0.05	OrthoFinder output from all 47 species
Ala_g18597	No alias	subunit alpha of coat protein complex & original...	0.04	OrthoFinder output from all 47 species
Als_g16600	No alias	subunit alpha of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Ceric.37G062500.1	Ceric.37G062500	subunit alpha of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Cre13.g565850	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.01	OrthoFinder output from all 47 species
GSVIVT01009813001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
Gb_09624	No alias	subunit alpha of coat protein complex	0.03	OrthoFinder output from all 47 species
LOC_Os03g50340.1	LOC_Os03g50340	subunit alpha of coat protein complex	0.05	OrthoFinder output from all 47 species
LOC_Os03g50350.1	LOC_Os03g50350	subunit alpha of coat protein complex	0.05	OrthoFinder output from all 47 species
LOC_Os09g04110.1	LOC_Os09g04110	subunit alpha of coat protein complex	0.04	OrthoFinder output from all 47 species
Lfl_g09317	No alias	subunit alpha of coat protein complex & original...	0.05	OrthoFinder output from all 47 species
MA_10428405g0010	No alias	subunit alpha of coat protein complex	0.04	OrthoFinder output from all 47 species
MA_10429054g0030	No alias	Coatomer subunit alpha-1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Mp3g00050.1	No alias	subunit alpha of coat protein complex	0.08	OrthoFinder output from all 47 species
Msp_g03578	No alias	subunit alpha of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Ore_g19289	No alias	subunit alpha of coat protein complex & original...	0.04	OrthoFinder output from all 47 species
Ppi_g17747	No alias	subunit alpha of coat protein complex & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022603	No alias	subunit alpha of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Smo85610	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.02	OrthoFinder output from all 47 species
Solyc04g080980.2.1	Solyc04g080980	subunit alpha of coat protein complex	0.06	OrthoFinder output from all 47 species
Solyc07g032100.3.1	Solyc07g032100	subunit alpha of coat protein complex	0.05	OrthoFinder output from all 47 species
Zm00001e005441_P001	Zm00001e005441	subunit alpha of coat protein complex	0.03	OrthoFinder output from all 47 species
Zm00001e012192_P001	Zm00001e012192	subunit alpha of coat protein complex	0.03	OrthoFinder output from all 47 species
Zm00001e016505_P002	Zm00001e016505	subunit alpha of coat protein complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
MF	GO:0015930	glutamate synthase activity	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010714	Coatomer_asu_C	804	1209
IPR001680	WD40_repeat	84	121
IPR001680	WD40_repeat	126	163
IPR001680	WD40_repeat	45	79
IPR001680	WD40_repeat	198	231
IPR001680	WD40_repeat	241	276
IPR006692	Coatomer_WD-assoc_reg	341	758

External Links

No external refs found!

Ehy_g12790

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation