MA_10435839g0010


Description : RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana (sp|q9lqv2|rdr1_arath : 811.0)


Gene families : OG_01_0000823 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000823_tree ,
OG_02_0002293 (LandPlants) Phylogenetic Tree(s): OG_02_0002293_tree ,
OG_03_0004327 (SeedPlants) Phylogenetic Tree(s): OG_03_0004327_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435839g0010
Cluster HCCA: Cluster_307

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011643001 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_17277 No alias Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa... 0.02 Archaeplastida
Gb_28426 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_28429 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_28433 No alias ssRNA polymerase (RDR2) 0.02 Archaeplastida
Solyc05g007510.4.1 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e015753_P001 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
GSVIVT01011643001 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana 0.05 LandPlants
Gb_28426 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.05 LandPlants
Solyc05g007510.4.1 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.03 LandPlants
Zm00001e015753_P001 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.05 LandPlants
GSVIVT01011643001 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana 0.05 SeedPlants
Gb_28426 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.02 SeedPlants
Solyc05g007510.4.1 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.03 SeedPlants
Zm00001e015753_P001 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 418 906
No external refs found!