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Description : regulatory factor *(TZF) of mRNA stress granule formation & original description: none
Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Adi_g049127 | |
| Cluster | HCCA: Cluster_369 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00102750 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G40140 | SZF2, ATSZF2, ZFAR1, CZF1 | zinc finger (CCCH-type) family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G07500 | PEI1 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G44260 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G58620 | No alias | zinc finger (CCCH-type) family protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g081004 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g124625 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05467 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05322 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g14168 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g21643 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene14185.t1 | Aspi01Gene14185 | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene30050.t1 | Aspi01Gene30050 | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71552.t1 | Aspi01Gene71552 | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0015.g014002 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0076.g037758 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0203.g057679 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03345 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05838 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g24777 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G078500.1 | Ceric.04G078500 | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G046400.1 | Ceric.07G046400 | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G053600.1 | Ceric.24G053600 | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Cre03.g146267 | ATTZF1, ATCTH | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g10045 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g15516 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18498 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01013901001 | PEI1 | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01032807001 | SZF2, ATSZF2, ZFAR1, CZF1 | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g03760.1 | LOC_Os05g03760 | mRNA-binding regulatory factor (TZF) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g45020.1 | ATTZF1, ATCTH,... | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g33090.1 | LOC_Os12g33090 | mRNA-binding regulatory factor (TZF) | 0.01 | OrthoFinder output from all 47 species | |
| Len_g18302 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g24865 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g00540.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g10175 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g15903 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g05906 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g10809 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g10470 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15984 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25247 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29320 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g35856 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g38666 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g39344 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g25039 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g04592 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g10785 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0008.g004066 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007306 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0030.g010425 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g28503 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Smo443970 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g041720.2.1 | PEI1, Solyc05g041720 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g052570.3.1 | SZF2, ATSZF2,... | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g008660.1.1 | Solyc12g008660 | mRNA-binding regulatory factor (TZF) | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g15791 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g41753 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g43052 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e027454_P001 | ATTZF1, ATCTH,... | mRNA-binding regulatory factor (TZF) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e027566_P001 | Zm00001e027566 | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029465_P001 | Zm00001e029465 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |