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  5. Ehy_g12508

Ehy_g12508


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g12508

Target Alias Description ECC score Gene Family Method Actions
AT2G35140 No alias DCD (Development and Cell Death) domain protein 0.01 OrthoFinder output from all 47 species
Adi_g006732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g109380 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06670 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g21904 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08733 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G073500.1 Ceric.11G073500 not classified & original description: pacid=50594821... 0.03 OrthoFinder output from all 47 species
Dac_g21312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019563001 No alias B2 protein OS=Daucus carota 0.02 OrthoFinder output from all 47 species
Gb_04338 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 90.9) 0.02 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.02 OrthoFinder output from all 47 species
LOC_Os05g51590.1 LOC_Os05g51590 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 248.0) 0.02 OrthoFinder output from all 47 species
LOC_Os06g12260.1 LOC_Os06g12260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g32270.1 LOC_Os11g32270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g23479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_112899g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 90.5) 0.02 OrthoFinder output from all 47 species
MA_15917g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g43565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo91200 No alias B2 protein OS=Daucus carota 0.03 OrthoFinder output from all 47 species
Spa_g39901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 175 299
No external refs found!