MA_10435606g0010


Description : Pentatricopeptide repeat-containing protein At1g71210, mitochondrial OS=Arabidopsis thaliana (sp|q8gza6|pp113_arath : 235.0)


Gene families : OG_01_0006096 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006096_tree ,
OG_02_0004418 (LandPlants) Phylogenetic Tree(s): OG_02_0004418_tree ,
OG_03_0003203 (SeedPlants) Phylogenetic Tree(s): OG_03_0003203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435606g0010
Cluster HCCA: Cluster_446

Target Alias Description ECC score Gene Family Method Actions
Gb_27816 No alias Pentatricopeptide repeat-containing protein At1g71210,... 0.03 Archaeplastida
LOC_Os02g03530.1 No alias Pentatricopeptide repeat-containing protein At1g71210,... 0.03 Archaeplastida
Pp3c1_6490V3.1 No alias proton gradient regulation 3 0.02 Archaeplastida
Zm00001e013539_P003 No alias no hits & (original description: none) 0.03 Archaeplastida
AMTR_s00022p00248730 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g71210,... 0.02 LandPlants
Gb_27816 No alias Pentatricopeptide repeat-containing protein At1g71210,... 0.02 LandPlants
LOC_Os02g03530.1 No alias Pentatricopeptide repeat-containing protein At1g71210,... 0.02 LandPlants
Pp3c1_6490V3.1 No alias proton gradient regulation 3 0.02 LandPlants
Zm00001e013539_P003 No alias no hits & (original description: none) 0.03 LandPlants
AMTR_s00022p00248730 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g71210,... 0.02 SeedPlants
Gb_27816 No alias Pentatricopeptide repeat-containing protein At1g71210,... 0.02 SeedPlants
LOC_Os02g03530.1 No alias Pentatricopeptide repeat-containing protein At1g71210,... 0.02 SeedPlants
Zm00001e013539_P003 No alias no hits & (original description: none) 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 435 460
IPR002885 Pentatricopeptide_repeat 378 402
IPR002885 Pentatricopeptide_repeat 100 125
IPR002885 Pentatricopeptide_repeat 68 92
IPR002885 Pentatricopeptide_repeat 466 494
IPR002885 Pentatricopeptide_repeat 199 248
IPR002885 Pentatricopeptide_repeat 531 579
IPR002885 Pentatricopeptide_repeat 672 718
IPR002885 Pentatricopeptide_repeat 604 648
IPR002885 Pentatricopeptide_repeat 741 789
No external refs found!