Solyc12g013660.2.1 (Solyc12g013660.2)


Aliases : Solyc12g013660.2

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g013660.2.1
Cluster HCCA cluster: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.03 Gene family
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.02 Gene family
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.02 Gene family
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G33710 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G35700 ERF38, ATERF38 ERF family protein 38 0.03 Gene family
AT3G15210 ATERF4, RAP2.5,... ethylene responsive element binding factor 4 0.02 Gene family
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.05 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.02 Gene family
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G50080 ERF110 ethylene response factor 110 0.02 Gene family
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.02 Gene family
GSVIVT01001089001 No alias No description available 0.03 Gene family
GSVIVT01018272001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
GSVIVT01019519001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01021146001 No alias No description available 0.02 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
GSVIVT01036389001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os01g64790 Os01g0868000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os01g66270 Os01g0885900 No description available 0.03 Gene family
LOC_Os02g06330 No alias No description available 0.02 Gene family
LOC_Os02g13710 Os02g0231000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g43790 Os02g0654700 No description available 0.02 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.03 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.02 Gene family
LOC_Os03g22170 Os03g0341000 No description available 0.03 Gene family
LOC_Os04g32620 Os04g0398000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os04g46240 Os04g0547500 No description available 0.03 Gene family
LOC_Os04g52090 Os04g0610400 No description available 0.02 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os05g27930 Os05g0346200 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os06g08340 Os06g0181700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os06g40150 Os06g0604000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os07g47330 Os07g0669500 No description available 0.03 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os08g36920 Os08g0474000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os08g44960 No alias 17.5.3 hormone... 0.02 Gene family
LOC_Os09g13940 Os09g0309700 No description available 0.02 Gene family
LOC_Os09g28440 Os09g0457900 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os10g25170 Os10g0390800 No description available 0.02 Gene family
LOC_Os10g38000 Os10g0523900 No description available 0.02 Gene family
LOC_Os10g41330 Os10g0562900 No description available 0.02 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_10031781g0010 No alias No description available 0.02 Gene family
MA_116185g0010 No alias No description available 0.01 Gene family
MA_15000g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_179692g0020 No alias No description available 0.02 Gene family
MA_19420g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_230706g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_256188g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_27309g0010 No alias No description available 0.03 Gene family
MA_3405g0010 No alias No description available 0.01 Gene family
MA_4032g0010 No alias No description available 0.02 Gene family
MA_4182g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_42369g0010 No alias No description available 0.02 Gene family
MA_55226g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_7960347g0010 No alias No description available 0.02 Gene family
MA_938274g0010 No alias No description available 0.02 Gene family
MA_96512g0020 No alias No description available 0.02 Gene family
Smo104978 PACid_15415926 No description available 0.01 Gene family
Solyc01g067540.1.1 Solyc01g067540.1 No description available 0.04 Gene family
Solyc01g090340.2.1 Solyc01g090340.2 No description available 0.03 Gene family
Solyc02g077840.1.1 Solyc02g077840.1 No description available 0.03 Gene family
Solyc03g093550.1.1 Solyc03g093550.1 No description available 0.02 Gene family
Solyc03g117230.1.1 Solyc03g117230.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc04g054910.3.1 Solyc04g054910.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.02 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.03 Gene family
Solyc06g050520.2.1 Solyc06g050520.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc06g068830.2.1 Solyc06g068830.2 No description available 0.03 Gene family
Solyc09g091950.1.1 Solyc09g091950.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc10g009110.1.1 Solyc10g009110.1 No description available 0.02 Gene family
Solyc11g045680.2.1 Solyc11g045680.2 No description available 0.03 Gene family
Solyc11g045690.2.1 Solyc11g045690.2 No description available 0.03 Gene family
Solyc12g038450.1.1 Solyc12g038450.1 No description available 0.03 Gene family
Solyc12g056980.1.1 Solyc12g056980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d000179 GRMZM5G889719 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.03 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d002011 GRMZM2G067463 No description available 0.02 Gene family
Zm00001d002744 GRMZM2G172936 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d012585 GRMZM2G132185 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d014113 GRMZM2G024871 17.5.3 hormone... 0.02 Gene family
Zm00001d016623 GRMZM2G047999 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d017477 GRMZM5G842961 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d019734 GRMZM2G123119 No description available 0.02 Gene family
Zm00001d020267 GRMZM2G141679 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.02 Gene family
Zm00001d025477 GRMZM2G424348 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d026182 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.03 Gene family
Zm00001d026447 GRMZM2G421033 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d027686 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d027925 GRMZM2G018984 No description available 0.02 Gene family
Zm00001d029679 GRMZM2G477287 No description available 0.02 Gene family
Zm00001d029940 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d031861 GRMZM2G028386 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d034920 GRMZM2G381441 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d036536 GRMZM2G175543 No description available 0.02 Gene family
Zm00001d038216 GRMZM2G481668 No description available 0.02 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.02 Gene family
Zm00001d042588 GRMZM2G105266 No description available 0.03 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d043491 GRMZM2G474326 No description available 0.02 Gene family
Zm00001d046292 GRMZM2G073047 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Zm00001d047860 GRMZM2G007406 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.03 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 39 88
No external refs found!