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  5. Adi_g046374

Adi_g046374


Description : component *(ECHIDNA) of trans-Golgi-network (TGN) trafficking complex & original description: none


Gene families : OG0003195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g046374
Cluster HCCA: Cluster_367

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00212990 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane... 0.03 OrthoFinder output from all 47 species
Ala_g02835 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Ala_g13162 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Als_g46232 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Als_g48639 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Aob_g00689 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.05 OrthoFinder output from all 47 species
Aop_g00185 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Ceric.11G056400.1 Ceric.11G056400 component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Dac_g01913 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
GSVIVT01028173001 No alias Vesicle trafficking.endomembrane... 0.02 OrthoFinder output from all 47 species
GSVIVT01031271001 No alias Vesicle trafficking.endomembrane... 0.02 OrthoFinder output from all 47 species
LOC_Os01g22870.1 LOC_Os01g22870 ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.04 OrthoFinder output from all 47 species
LOC_Os05g06700.1 LOC_Os05g06700 ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.03 OrthoFinder output from all 47 species
Lfl_g05267 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
MA_10435880g0010 No alias ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.02 OrthoFinder output from all 47 species
MA_10435880g0020 No alias ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.03 OrthoFinder output from all 47 species
MA_8217282g0010 No alias ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.02 OrthoFinder output from all 47 species
Msp_g19678 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Msp_g45527 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Ore_g06892 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Ore_g20464 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Pir_g00840 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Pp3c26_12900V3.1 Pp3c26_12900 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c4_27310V3.1 Pp3c4_27310 No annotation 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010364 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Solyc06g073270.4.1 Solyc06g073270 ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.06 OrthoFinder output from all 47 species
Spa_g11569 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR008564 TVP23-like 1 96
No external refs found!