Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Adi_g045665 | |
Cluster | HCCA: Cluster_323 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aob_g04978 | XERICO | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g30955 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g15120.1 | ATL6, LOC_Os02g15120 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g49710.1 | LOC_Os02g49710 | IDF1 iron uptake IRT1-ubiquitin ligase | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g24829 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g26079 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g088450.2.1 | Solyc01g088450 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g109820.1.1 | Solyc01g109820 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g085270.1.1 | Solyc02g085270 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g054370.1.1 | BRH1, Solyc04g054370 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e034829_P001 | RHA3A, Zm00001e034829 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e041385_P001 | Zm00001e041385 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 74 | 117 |
No external refs found! |