Solyc12g010410.2.1 (Solyc12g010410.2)


Aliases : Solyc12g010410.2

Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5).


Gene families : OG_01_0000241 (Gene family) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g010410.2.1
Cluster HCCA cluster: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AT1G23380 KNAT6, KNAT6L, KNAT6S KNOTTED1-like homeobox gene 6 0.03 Gene family
GSVIVT01007715001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
GSVIVT01009273001 No alias No description available 0.02 Gene family
GSVIVT01012897001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
GSVIVT01013790001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
GSVIVT01018257001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
GSVIVT01031241001 No alias 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
LOC_Os03g47016 Os03g0673000 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.05 Gene family
LOC_Os03g51690 Os03g0727000 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.05 Gene family
LOC_Os03g51710 Os03g0727150,... No description available 0.03 Gene family
Smo135843 PACid_15417235 No description available 0.03 Gene family
Solyc05g005090.3.1 Solyc05g005090.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.04 Gene family
Zm00001d034212 GRMZM2G135447 No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005541 KNOX2 124 172
IPR005540 KNOX1 66 107
IPR008422 Homeobox_KN_domain 272 311
No external refs found!