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Aliases : HDT3, HD2C
Description : HD2-type histone deacetylase *(HD2/HDT) & original description: none
Gene families : OG0002165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002165_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00043p00194480 | HD2, HDA4, HD2B,... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AT2G27840 | HDA13, HDT04, HDT4 | histone deacetylase-related / HD-related | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g045242 | No alias | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54155 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g05943 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12332 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g15503 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0245.g060013 | No alias | not classified & original description: CDS=211-1146 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g31332 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G031600.1 | HDA3, ATHD2A,... | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g551050 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g20303 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g20489 | HDA3, ATHD2A, HDT1, HD2A | peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01031404001 | HDA3, ATHD2A, HDT1, HD2A | Chromatin organisation.histone modifications.histone... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38523 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os05g51830.1 | HDT3, HD2C,... | histone deacetylase (HDT/HD2) | 0.03 | OrthoFinder output from all 47 species | |
| MA_118767g0010 | HDA3, ATHD2A, HDT1, HD2A | histone deacetylase (HDT/HD2) | 0.02 | OrthoFinder output from all 47 species | |
| MA_3905g0010 | No alias | histone deacetylase (HDT/HD2) | 0.04 | OrthoFinder output from all 47 species | |
| MA_3905g0020 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_601245g0010 | No alias | histone deacetylase (HDT/HD2) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g19073 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g12444 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13916 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14662 | No alias | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g33699 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g53163 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g009030.4.1 | HDA3, ATHD2A,... | histone deacetylase (HDT/HD2) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g40541 | HDT3, HD2C | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14352 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g20431 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e032246_P002 | HDA3, ATHD2A,... | histone deacetylase (HDT/HD2) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004055 | argininosuccinate synthase activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
| BP | GO:0006525 | arginine metabolic process | IEP | HCCA |
| BP | GO:0006526 | arginine biosynthetic process | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR041232 | NPL | 2 | 87 |
| No external refs found! |