MA_10435445g0010


Description : type-Ia DNA topoisomerase


Gene families : OG_01_0003494 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003494_tree ,
OG_02_0003651 (LandPlants) Phylogenetic Tree(s): OG_02_0003651_tree ,
OG_03_0004734 (SeedPlants) Phylogenetic Tree(s): OG_03_0004734_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435445g0010
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00253660 evm_27.TU.AmTr_v1... Cell cycle.organelle machineries.DNA replication.type-Ia... 0.05 Archaeplastida
AT4G31210 No alias DNA topoisomerase, type IA, core 0.02 Archaeplastida
GSVIVT01035576001 No alias Cell cycle.organelle machineries.DNA replication.type-Ia... 0.03 Archaeplastida
Gb_30151 No alias type-Ia DNA topoisomerase 0.06 Archaeplastida
Solyc02g081910.2.1 No alias type-Ia DNA topoisomerase 0.02 Archaeplastida
Zm00001e036824_P001 No alias type-Ia DNA topoisomerase 0.02 Archaeplastida
AMTR_s00006p00253660 evm_27.TU.AmTr_v1... Cell cycle.organelle machineries.DNA replication.type-Ia... 0.04 LandPlants
AT4G31210 No alias DNA topoisomerase, type IA, core 0.02 LandPlants
GSVIVT01035576001 No alias Cell cycle.organelle machineries.DNA replication.type-Ia... 0.03 LandPlants
Gb_30151 No alias type-Ia DNA topoisomerase 0.06 LandPlants
Solyc02g081910.2.1 No alias type-Ia DNA topoisomerase 0.02 LandPlants
Zm00001e036824_P001 No alias type-Ia DNA topoisomerase 0.02 LandPlants
AMTR_s00006p00253660 evm_27.TU.AmTr_v1... Cell cycle.organelle machineries.DNA replication.type-Ia... 0.03 SeedPlants
AT4G31210 No alias DNA topoisomerase, type IA, core 0.01 SeedPlants
GSVIVT01035576001 No alias Cell cycle.organelle machineries.DNA replication.type-Ia... 0.03 SeedPlants
Gb_30151 No alias type-Ia DNA topoisomerase 0.05 SeedPlants
Solyc02g081910.2.1 No alias type-Ia DNA topoisomerase 0.01 SeedPlants
Zm00001e030979_P001 No alias type-Ia DNA topoisomerase 0.01 SeedPlants
Zm00001e036824_P001 No alias type-Ia DNA topoisomerase 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003916 DNA topoisomerase activity IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006171 TOPRIM_domain 477 591
IPR013497 Topo_IA_cen 606 765
No external refs found!