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  5. Adi_g044375

Adi_g044375 (PAT1)


Aliases : PAT1

Description : GRAS-type transcription factor & original description: none


Gene families : OG0000550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000550_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g044375

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00161000 PAT1,... RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
AMTR_s00186p00018500 SCL1,... RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
AT1G50600 SCL5 scarecrow-like 5 0.03 OrthoFinder output from all 47 species
Adi_g023908 SCL5 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05274 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g00898 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02729 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026482001 SCL1 RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
GSVIVT01037777001 PAT1 RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
LOC_Os07g39470.1 PAT1, LOC_Os07g39470 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
MA_10431132g0010 PAT1 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Ore_g16498 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20467 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16566 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g047950.1.1 PAT1, Solyc07g047950 transcription factor (GRAS) 0.06 OrthoFinder output from all 47 species
Solyc12g005340.3.1 PAT1, Solyc12g005340 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Spa_g07387 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 1 126
No external refs found!