1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g042773

Adi_g042773


Description : associated component *(AFR) of histone deacetylase machineries & original description: none


Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g042773

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00143240 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
Adi_g016707 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Adi_g115577 No alias associated component *(AFR) of histone deacetylase... 0.05 OrthoFinder output from all 47 species
Ala_g01904 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Als_g09801 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Als_g23594 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Aop_g26979 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Azfi_s0084.g038914 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Azfi_s3373.g115509 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Cba_g50138 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Ceric.28G016000.1 Ceric.28G016000 associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Dde_g06294 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Ehy_g09035 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
GSVIVT01019028001 No alias Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
GSVIVT01019388001 No alias Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
LOC_Os04g08450.3 LOC_Os04g08450 associated component SAP30 of histone deacetylase machineries 0.03 OrthoFinder output from all 47 species
LOC_Os10g21460.1 LOC_Os10g21460 associated component SAP30 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species
Len_g14311 No alias associated component *(AFR) of histone deacetylase... 0.08 OrthoFinder output from all 47 species
Lfl_g18360 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Msp_g09871 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Ppi_g30334 No alias associated component *(AFR) of histone deacetylase... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007685 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Sam_g20047 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Solyc04g079930.3.1 Solyc04g079930 associated component SAP30 of histone deacetylase machineries 0.03 OrthoFinder output from all 47 species
Spa_g11049 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Tin_g10450 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Tin_g12084 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!