Solyc12g006320.2.1 (Solyc12g006320.2)


Aliases : Solyc12g006320.2

Description : 27.1.2 RNA.processing.RNA helicase DEAD-box protein required for efficient group II intron splicing in mitochondria. putative mitochondrial RNA helicase 2 (PMH2)


Gene families : OG_01_0001864 (Gene family) Phylogenetic Tree(s): OG0001864_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc12g006320.2.1
Cluster HCCA cluster: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
AT5G26742 emb1138 DEAD box RNA helicase (RH3) 0.04 Gene family
LOC_Os03g61220 Os03g0827700 27.1.2 RNA.processing.RNA helicase embryo defective 1138... 0.03 Gene family
Zm00001d012922 GRMZM2G415491 27.1.2 RNA.processing.RNA helicase embryo defective 1138... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 135 302
IPR001650 Helicase_C 342 450
No external refs found!